BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027C04SP1|AL428690
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1287 1697 0.0
>3x_Contig1287
Length = 6942
Score = 1697 bits (856), Expect = 0.0
Identities = 875/879 (99%), Gaps = 3/879 (0%)
Strand = Plus / Plus
Query: 1 ttgatgatcgccgtggacaataatgtatcgtaaggccatataagcattagaatagggaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3549 ttgatgatcgccgtggacaataatgtatcgtaaggccatataagcattagaatagggaag 3608
Query: 61 attttcgcaccatacgaaattaataaaatatagtatactatgtccttacgatactttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3609 attttcgcaccatacgaaattaataaaatatagtatactatgtccttacgatactttaaa 3668
Query: 121 acctttccccaattccatctgtttataagaacatattgaaatacgctgtgtagcacaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3669 acctttccccaattccatctgtttataagaacatattgaaatacgctgtgtagcacaatc 3728
Query: 181 atttcaatcatcacatacgcaaagaagaatagatactgtacccagacagatccttcaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3729 atttcaatcatcacatacgcaaagaagaatagatactgtacccagacagatccttcaagt 3788
Query: 241 atattgtagatcattaatttgttggaaaacatgaattcactactatacttcgaaaatttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3789 atattgtagatcattaatttgttggaaaacatgaattcactactatacttcgaaaatttc 3848
Query: 301 gtttccactgtgacccaatttaaatacacttcgaatgcaacaaggaaaacttgtaatctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3849 gtttccactgtgacccaatttaaatacacttcgaatgcaacaaggaaaacttgtaatctg 3908
Query: 361 ctcaattgatcatatttctttaaccaatttctaacattagttgcaaaaactttgaattga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3909 ctcaattgatcatatttctttaaccaatttctaacattagttgcaaaaactttgaattga 3968
Query: 421 ttccacgtacttagcttttgtcggctaattttccattccggatgtttccttagctgtaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3969 ttccacgtacttagcttttgtcggctaattttccattccggatgtttccttagctgtaat 4028
Query: 481 tccagtttattgaatgtcatatgtcgatatgctcccttcttcagtagtaaaaggtcaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4029 tccagtttattgaatgtcatatgtcgatatgctcccttcttcagtagtaaaaggtcaatg 4088
Query: 541 gacaaaagtactggatcaaactccacatatttgtccacaacttgggagcattttgggcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4089 gacaaaagtactggatcaaactccacatatttgtccacaacttgggagcattttgggcag 4148
Query: 601 tcggtaagtctaatatggtcccccgaatagatcacatataaggattccacttggtgacca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4149 tcggtaagtctaatatggtcccccgaatagatcacatataaggattccacttggtgacca 4208
Query: 661 cagtttatacatatcataatttggctaggaattgcagatagaataacaatactgccgctt 720
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 4209 cagtttatacatatcataatttggctaggtattgcagatagaataacaatactgccgctt 4268
Query: 721 tcattatttcatgtaagctttctgatcaatttcttgcag--ttttcttcccactcaagta 778
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4269 tcattatttcatgtaagctttctgatcaatttcttgcagttttttcttcccactcaagta 4328
Query: 779 aaacacgagcagtgatgtactcttacactatttagatattggtgttttgctgatattggt 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4329 aaacacgagcagtgatgtactcttacactatttagatattggtgttttgctgatattggt 4388
Query: 839 ttttttgtcactttacatcaaag-aaatataaaaactgg 876
||||||||||||||||||||||| |||||||||||||||
Sbjct: 4389 ttttttgtcactttacatcaaagcaaatataaaaactgg 4427
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7464
Number of Sequences: 1807
Number of extensions: 7464
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)